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  4. F14 - Faculty of Biochemistry, Chemistry and Pharmacy
  5. Faculty of Biochemistry, Chemistry and Pharmacy: Research Data
  6. NMR characterisation of the antibiotic resistance-mediating 32mer RNA from the 23S ribosomal RNA
 
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Title(s)
TitleLanguage
NMR characterisation of the antibiotic resistance-mediating 32mer RNA from the 23S ribosomal RNA
en
 
Author(s)
NameORCIDGNDAffiliation
Muhs, Christina 
0009-0002-0831-6619
Organic Chemistry and Chemical Biology 
Lena Kemper
Organic Chemistry and Chemical Biology 
Wacker, Anna
0000-0001-5892-5661
Organic Chemistry and Chemical Biology 
Schwalbe, Harald Jochen 
0000-0001-5693-7909
Organic Chemistry and Chemical Biology 
Richter, Christian 
0000-0002-5420-2826
Organic Chemistry and Chemical Biology 
Francesca Lavore
0000-0001-7540-1528
Utrecht University 
Markus Weingarth
0000-0003-0831-8673
Utrecht University 
 
Faculty
14 Biochemistry, Chemistry and Pharmacy
 
Date Issued
26 February 2025
 
Publisher(s)
Goethe-Universität Frankfurt
 
Handle
https://gude.uni-frankfurt.de/handle/gude/483
 
DOI
10.25716/gude.0wv1-r4p4
 

Type(s) of data
Dataset
 
Language(s)
en
 
Subject Keyword(s)
  • m6A

  • DMA

  • erythromycin methyl t...

  • antibiotic resistance...

  • solution NMR-spectros...

  • 23S ribosomal RNA

 
Abstract(s)
AbstractLanguage
The increasing prevalence of antibiotic resistance represents a significant public health concern, underscoring the urgent need for the development of novel therapeutic strategies. Macrolides, the second most widely used class of antibiotics, are inhibited by Erm-proteins through the methylation of adenosine 2058 of the 23S ribosomal RNA (rRNA) (~2900 nucleotides). This methylation is the molecular basis for preventing macrolides from binding and bacteria (Staphylococcus, Streptococcus and Enterococcus) developing resistance. While Erm-proteins have received considerable attention, the role of the ribosomal RNA in acquiring antibiotic resistance is frequently undervalued, even though the ribosomal RNA is the chemical target for methylation. Here, we present the comprehensive resonance assignment for 1H, 13C and 15N for the part of the 23S RNA that serves as the Erm substrate in antimicrobial resistance by solution NMR spectroscopy. Furthermore, we compare the chemical shift signature of the methylated and dimethylated RNA construct and show that changes in the RNA upon methylation are locally restricted. The chemical shift assignments provide a starting point for investigating and targeting the molecular mechanism of the resistance-conferring Erm proteins.
en
 

License
All rights reserved
 

Views
17
Acquisition Date
May 10, 2025
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