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  4. F14 - Faculty of Biochemistry, Chemistry and Pharmacy
  5. Faculty of Biochemistry, Chemistry and Pharmacy: Research Data
  6. 1H, 13C and 15N chemical shift assignment for stem-loop 5a from the 5‘UTR of HCoV-229E
 
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Title(s)
TitleLanguage
1H, 13C and 15N chemical shift assignment for stem-loop 5a from the 5‘UTR of HCoV-229E
en
 
Author(s)
NameORCIDGNDAffiliation
Krause, Nina Magdalena 
Organic Chemistry and Chemical Biology 
Wacker, Anna
0000-0001-5892-5661
Organic Chemistry and Chemical Biology 
Richter, Christian 
0000-0002-5420-2826
Organic Chemistry and Chemical Biology 
Fürtig, Boris
0000-0001-6443-7656
Biotest AG
Madhugiri, Ramakanth
0000-0002-9306-4155
University of Giessen 
Ziebuhr, John
0000-0002-5741-8825
University of Giessen 
Schwalbe, Harald Jochen 
0000-0001-5693-7909
Organic Chemistry and Chemical Biology 
 
Faculty
14 Biochemistry, Chemistry and Pharmacy
 
Date Issued
18 June 2025
 
Publisher(s)
Goethe-Universität Frankfurt
 
Handle
https://gude.uni-frankfurt.de/handle/gude/604
 
DOI
10.25716/gude.176r-eady
 

Type(s) of data
Dataset
 
Language(s)
en
 
Subject Keyword(s)
  • Coronaviruses

  • HCoV-229E

  • 5‘-UTR

  • SL5a

  • Solution NMR spectros...

 
Abstract(s)
AbstractLanguage
Due to the emergence of the SARS-CoV-2 virus, research on coronaviruses has been massively accelerated. In addition to SARS-CoV-2, there are other human infectious coronaviruses, including HCoV-229E. In all coronaviruses, secondary structure predictions indicate the presence of conserved structural elements in the 5'-untranslated region (5'-UTR). These conserved elements play crucial roles in RNA translation and replication. Stem-loop 5 (SL5), consisting of three substructures (5a, 5b, 5c), is highly conserved and harbours the start codon for viral translation. SL5 has repetitive structural motifs (RSMs), 5'-UUYYGU-3', which are conserved in many Alpha- and Betacoronaviruses. In the following, we present the 1H, 13C and 15N NMR resonance assignment of the SL5a RNA element from HCoV-229E and variations in the RSMs to show the effect of loop mutations on the structure of the hexaloop, revealing the different impact of each loop nucleotide on RNA dynamics.
en
 

License
All rights reserved
 

Views
16
Acquisition Date
Jul 28, 2025
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Downloads
2
Acquisition Date
Jul 28, 2025
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