Repository logo
  • Log In
    or
Goethe UniversityGUDe
  • Communities
  • Research Data
  • Organisations
  • Projects
  • People
  • Documentation
  • Log In
    or
  1. Home
  2. Goethe University Frankfurt
  3. Faculties
  4. F14 - Faculty of Biochemistry, Chemistry and Pharmacy
  5. Faculty of Biochemistry, Chemistry and Pharmacy: Research Data
  6. Single-molecule dynamics reveal ATP binding alone powers substrate translocation by an ABC transporter
 
  • Details
  • Files
Options
Title(s)
TitleLanguage
Single-molecule dynamics reveal ATP binding alone powers substrate translocation by an ABC transporter
en
 
Author(s)
NameORCIDGNDAffiliation
Christoph Nocker
Faculty of Biochemistry, Chemistry and Pharmacy 
 
Contributor(s)
NameORCIDGNDAffiliationRole
Pečak, Matija
Faculty of Biochemistry, Chemistry and Pharmacy 
DataCollector
Nocker, Tobias
Faculty of Biochemistry, Chemistry and Pharmacy 
DataCollector
Amin Fahim
Faculty of Biochemistry, Chemistry and Pharmacy 
DataCollector
Susac, Lukas
Faculty of Biochemistry, Chemistry and Pharmacy 
DataCollector
Tampé, Robert 
0000-0002-0403-2160
1245874411
Faculty of Biochemistry, Chemistry and Pharmacy 
ContactPerson
 
Project(s)
SFB 1507 - P18 Protein Assemblies and Machineries in Antigen Processing and ER Quality Control 
 
Faculty
14 Biochemistry, Chemistry and Pharmacy
 
Date Issued
25 July 2025
 
Publisher(s)
Goethe-Universität Frankfurt
 
Handle
https://gude.uni-frankfurt.de/handle/gude/636.2
 
DOI
10.25716/gude.0frp-685b
 

Type(s) of data
Dataset
 
Language(s)
en
 
Subject Keyword(s)
  • ABC transporters

  • conformational dynami...

  • membrane proteins

  • membrane translocatio...

  • single-molecule FRET

  • single-molecule senso...

 
Abstract(s)
AbstractLanguage
ATP-binding cassette (ABC) transporters are molecular machines involved in diverse physiological processes, including antigen processing by TAP, a key component of adaptive immunity. TAP and its bacterial homolog TmrAB use ATP to translocate peptides across membranes, yet the precise mechanism linking ATP binding to substrate movement remains unclear. Here, we employ a single-molecule FRET sensor to visualize single translocation events by individual ABC transporters, overcoming the limitations of ensemble averaging. This approach reveals that substrate transport is driven by a conformational switch from the inward- to the outward-facing state. Using a slow-turnover TmrAB variant, we demonstrate that ATP binding alone, even in the absence of Mg2+, is sufficient to drive a single round of peptide translocation. Cryo-EM structures of wild-type and slow-turnover TmrAB show that ATP binding induces the outward-facing conformation without Mg2+. In wild-type TmrAB, this conformational transition supports a single translocation event, whereas Mg2+-dependent ATP hydrolysis is required to reset the transporter. These findings establish a direct mechanistic link between ATP binding and substrate translocation at single-molecule resolution, providing new insights into the catalytic cycle of ABC transporters.
en
 
Description(s)
DescriptionLanguage
Supplementary material and Source data contributing to the paper 'Single-molecule dynamics reveal ATP binding alone powers substrate translocation by an ABC transporter'.
en
 

Funder(s)
NameType of identifierFunder identifierAward numberAward titleAward URI
European Research Council
101141396
ERC Advanced Grant
Collaborative Research Center
CRC1507/P18&Z02
 

License
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) cclicense-logocclicense-logocclicense-logocclicense-logo
 

Views
5
Acquisition Date
Nov 26, 2025
View Details
Downloads
2
Acquisition Date
Nov 26, 2025
View Details

Orcid
DSpace-CRIS
Datacite
Legal Terms
  • Terms of Use
  • Publication Contract
  • Legal Notice
Privacy
  • Privacy Information
  • Cookie Settings
Help & Information
  • User Documentation
  • Contact Us
Resources for Developers
  • API Explorer (HAL Browser)
  • API REST Contract
  • API Python Client